Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCATGGAGCCT
....((((((...((((((...&))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001368318
GeneSymbolARHGEF35
Binding site185,201
Score0.821
Seed0
Au0.397
Energy-23.7
Binding len16
Me-17.007
Phylopstem0.3728182666666667
Phylopflank0.33698365625
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure