Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGTGTGCACAGGA
.((((((((((..(((((....&))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001177479
GeneSymbolHDX
Binding site323,340
Score0.923
Seed1
Au0.588
Energy-17.3
Binding len17
Me-8.429
Phylopstem1.0668457272727272
Phylopflank0.3978843765
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure