Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGACCGGCTGCAGCTCTGCAT
.((((((((((((((...(((&)))...)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330446
GeneSymbolFAM118B
Binding site1540,1563
Score1.0
Seed1
Au0.441
Energy-21.5
Binding len23
Me-4.026
Phylopstem1.0160181625
Phylopflank0.3773859499999999
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure