Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATTTTAAACTGCCAA
...(((((((.(((((((((..&))))))))).))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001177563
GeneSymbolPPP2R1B
Binding site3123,3144
Score0.846
Seed0
Au0.706
Energy-15.6
Binding len21
Me-9.339
Phylopstem1.6017954444444444
Phylopflank1.0201575049999998
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure