Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTTATTGAGCATTTGCTGTATGCCAGGC
.(((((((((((..((((((..&.))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001177972
GeneSymbolVIT
Binding site1523,1554
Score1.0
Seed1
Au0.632
Energy-23.3
Binding len19
Me-5.939
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure