Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTTCCTGTGTGCCGGGC
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001178
GeneSymbolARNTL
Binding site238,256
Score1.0
Seed1
Au0.441
Energy-19.8
Binding len13
Me-6.908
Phylopstem1.950240909090909
Phylopflank0.6488046243749999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure