Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAAGACCCAGCCGCAGGCCTGCAGT
(((((((((((((((...(((&.))))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001368769
GeneSymbolB9D1
Binding site2007,2035
Score0.917
Seed1
Au0.353
Energy-24.2
Binding len22
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure