Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGTGTGTCAGA
..((((((((((((........&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001178040
GeneSymbolSTX3
Binding site1282,1295
Score1.0
Seed1
Au0.485
Energy-16.9
Binding len13
Me-5.925
Phylopstem0.6668734
Phylopflank0.3366993265
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure