Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTGTCAAGTGCCGGGG
.(((((((((((((........&)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001178046
GeneSymbolMX1
Binding site986,1003
Score0.923
Seed1
Au0.412
Energy-16.8
Binding len17
Me-4.762
Phylopstem2.783105125
Phylopflank3.2950880355000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure