Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTGGAATGCCAGGG
.((((((((.(((.((((....&)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001178083
GeneSymbolEXT2
Binding site5144,5162
Score0.923
Seed1
Au0.529
Energy-21.0
Binding len18
Me-5.893
Phylopstem0.250090675
Phylopflank-0.00016949750000000343
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure