Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTACACTGTTCAAATAAGCACTAAGTCAGGA
.((((((..(((.(((((((((&))))))))).)))...............)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001178096
GeneSymbolF3
Binding site313,348
Score0.846
Seed1
Au0.647
Energy-17.2
Binding len35
Me-8.452
Phylopstem0.4659662222222221
Phylopflank0.7883951425000002
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end8
PositionCDS
2D Structure