Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAATTGCCGTGGCTGGGATGAAGGGTGAGCCAGG
..(((((((((((((((((...&))))))))....................)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001368882
GeneSymbolCOL13A1
Binding site1489,1528
Score0.846
Seed1
Au0.353
Energy-23.9
Binding len39
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end5
PositionCDS
2D Structure