Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCACTCAGCCTGCTCGCCCACTTTCGGACGGCCGAGCTGCAGG
((((((((.((((((((((((&.)))))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001368885
GeneSymbolCOL13A1
Binding site679,726
Score0.923
Seed1
Au0.265
Energy-24.3
Binding len25
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure