Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGCCATGGA
.(((((((((((..........&))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001178134
GeneSymbolCXCL12
Binding site624,637
Score0.846
Seed1
Au0.544
Energy-16.5
Binding len13
Me-6.908
Phylopstem0.6361564766666666
Phylopflank0.4121002494999999
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end0
Position3UTR
2D Structure