Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGGAGGCCAA
...((((...((((((((....&))))))))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001178141
GeneSymbolTFDP2
Binding site7378,7394
Score0.846
Seed0
Au0.456
Energy-17.9
Binding len16
Me-11.127
Phylopstem2.27436675
Phylopflank1.2107356025000002
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure