Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGTAGATGCTAGA
..(((((((.(.(((((((...&))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001183
GeneSymbolATP6AP1
Binding site1629,1646
Score0.846
Seed1
Au0.485
Energy-17.5
Binding len17
Me-9.546
Phylopstem-0.18888361428571424
Phylopflank0.028795043749999943
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure