Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTGGAGAATGCTGGCTGCAGAGTGCCAGGGTAGCTAGAAAGGCTGGTCA
.((((((((((((((((((((&))).)).)))....))))))))........................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001184
GeneSymbolATR
Binding site5785,5836
Score0.846
Seed1
Au0.441
Energy-23.8
Binding len51
Me-3.793
Phylopstem2.5603592099999997
Phylopflank2.3454665075000003
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure