Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGAGGAAGAAACAGCCCAGGCCGTTGCTGCAGAGAAGTGGTCA
.((((((((((((((((((..&)).))))).................)))))))......)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001184743
GeneSymbolPGBD1
Binding site1061,1104
Score0.923
Seed1
Au0.441
Energy-20.9
Binding len43
Me-3.793
Phylopstem0.4901742595238095
Phylopflank0.18899385999999996
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure