Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTGTCTCTCTAGTGTAGCCAGGC
.((((((.((((...((((...&.)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001184745
GeneSymbolPPP1R3F
Binding site1271,1298
Score0.846
Seed1
Au0.441
Energy-17.5
Binding len17
Me-8.988
Phylopstem0.7924047166666667
Phylopflank0.4674888012499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure