Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCGGAAGGGAGAACGGGGCATGCCAGG
..(((((((((((((((.(...&).))))))))))...........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001368896
GeneSymbolCOL13A1
Binding site1289,1318
Score0.846
Seed1
Au0.309
Energy-23.0
Binding len29
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end4
PositionCDS
2D Structure