Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACTGCAGCGAGCAGC
((((.(((((((.(((.....&))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331027
GeneSymbolHADH
Binding site1543,1560
Score0.923
Seed0
Au0.544
Energy-18.6
Binding len17
Me-9.346
Phylopstem0.09192145714285715
Phylopflank-0.8342402949999999
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
Position3UTR
2D Structure