Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACGAAGCAGCCAGGTA
(((((((......(((((((..&))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001184830
GeneSymbolVSIG4
Binding site1027,1047
Score0.846
Seed1
Au0.529
Energy-19.0
Binding len20
Me-16.011
Phylopstem-0.051316728571428584
Phylopflank0.1707242499999999
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure