Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATAACAGCTGGTCAATTGTATGTCAGTGTT
((((((((((((((...((((.&.)))).)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001184906
GeneSymbolFBXL20
Binding site2775,2808
Score0.923
Seed1
Au0.588
Energy-17.5
Binding len22
Me-4.906
Phylopstem0.49862768
Phylopflank0.055582641249999995
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure