Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCCGTGAACCCCACGTGCATGTGCTGCCAGGC
.((((((((((.(((((.....&.)))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001184940
GeneSymbolFAM219A
Binding site799,834
Score0.846
Seed1
Au0.353
Energy-19.4
Binding len18
Me-7.14
Phylopstem-0.3166603636363637
Phylopflank0.25243896125000004
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure