Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGCTGGCCAGGA
.((((((...((.(((((....&))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001184975
GeneSymbolPACSIN3
Binding site1427,1442
Score0.846
Seed1
Au0.382
Energy-16.3
Binding len15
Me-9.695
Phylopstem3.282764333333334
Phylopflank4.159005075
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure