Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGTGGCTGTGTGCCAGGTA
((((((((((((..........&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001185094
GeneSymbolNIT1
Binding site260,281
Score0.923
Seed1
Au0.426
Energy-21.8
Binding len14
Me-7.052
Phylopstem4.344825766666667
Phylopflank2.2588348600000003
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure