Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGCCCTGGCCGTCTGCAGCTTGTGTGCCATGTC
((.(((((((((((((((((..&.)))))))..)))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001185114
GeneSymbolCD1E
Binding site461,494
Score1.0
Seed0
Au0.397
Energy-22.8
Binding len24
Me-5.495
Phylopstem0.22844437894736844
Phylopflank0.12873657874999994
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure