Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCAAAAACAGAAGAAAAAAATATATTGTTCAAACTGATGCCAGGC
.((((((((((((((((..(((&.)))..))))))))........)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001185127
GeneSymbolVAMP4
Binding site2960,3007
Score0.846
Seed1
Au0.662
Energy-18.8
Binding len31
Me-3.793
Phylopstem0.10945091166666669
Phylopflank0.06467820799999993
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure