Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCATGTGTCACAGGTTTGTGGAGCCTTCAGCCAGGTG
(((((((((((.((((((....&)))))))))).....................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001190259
GeneSymbolGCSAM
Binding site2340,2379
Score0.846
Seed1
Au0.485
Energy-16.8
Binding len39
Me-7.284
Phylopstem-0.3231285218750001
Phylopflank-0.12367859999999997
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end4
Position3UTR
2D Structure