Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTTCATTGTAGTCCAGGA
.(((((..(((((((.((....&)).)))))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001331029
GeneSymbolPPP1R12B
Binding site9302,9320
Score0.846
Seed0
Au0.603
Energy-18.2
Binding len18
Me-7.884
Phylopstem-0.10491414285714286
Phylopflank0.44653785375
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end3
Position3UTR
2D Structure