Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATACTAACTGCCACCACTTATTAAGTGCCTACTGTGTGCCAGGC
.(((((((((((..((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001190384
GeneSymbolGNE
Binding site3618,3664
Score1.0
Seed1
Au0.559
Energy-23.8
Binding len17
Me-5.939
Phylopstem5.560565363636363
Phylopflank4.719644494999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure