Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAGCTGCT
..(((((((((((........&))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001368999
GeneSymbolAPTX
Binding site1321,1334
Score0.923
Seed1
Au0.456
Energy-19.7
Binding len13
Me-6.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure