Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACATGGGCCAGGA
.((((((.....((((((((..&))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001190482
GeneSymbolPCSK5
Binding site5978,5995
Score0.808
Seed1
Au0.559
Energy-20.6
Binding len17
Me-14.577
Phylopstem4.674137
Phylopflank3.5171541025
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure