Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTACATTGCCTTTAAGAAACTATGACTTGTAGTAAGCCGGGC
.((((((.((((((((((((((&)))))))))))........................))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004804
GeneSymbolCIAO1
Binding site3138,3184
Score0.885
Seed1
Au0.485
Energy-21.4
Binding len46
Me-6.107
Phylopstem-0.27705101315789465
Phylopflank0.04163861000000001
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end8
Position3UTR
2D Structure