Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGAAAAAACACAGAATCTTGGCCAGCAGCCAGCAGCTGCAT
.(((((((((((((((..(((&.))).)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331029
GeneSymbolPPP1R12B
Binding site9361,9406
Score1.0
Seed1
Au0.544
Energy-29.2
Binding len22
Me-3.793
Phylopstem-0.24235463750000003
Phylopflank-0.1259556837500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure