Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTTGCCAGT
..((((((...((((((((...&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001369033
GeneSymbolARHGEF9
Binding site5251,5266
Score0.923
Seed1
Au0.632
Energy-17.9
Binding len15
Me-10.081
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure