Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCTGGGGAGAGGGCCGGG
..(((((((((((((((((...&)))))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001369033
GeneSymbolARHGEF9
Binding site4375,4394
Score0.885
Seed1
Au0.382
Energy-23.2
Binding len19
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure