Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGATGTGTCCAGGG
.(((((.(((((.(((((....&))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004845
GeneSymbolPCYT1B
Binding site5299,5316
Score0.846
Seed0
Au0.559
Energy-19.8
Binding len17
Me-6.626
Phylopstem2.169598
Phylopflank3.023500008762499
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure