Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGCAAGCATGCTCCTGTGTGTCAGGA
.(((((((((((((((......&.)))).....))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004845
GeneSymbolPCYT1B
Binding site4857,4886
Score0.846
Seed1
Au0.471
Energy-18.5
Binding len22
Me-3.793
Phylopstem5.727576000000001
Phylopflank5.4699770025
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure