Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGAATTCCTCCACAACTTTTAATATTTTGTATGCCAGT
..(((((((((((.(((.....&.))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004866
GeneSymbolSCAMP1
Binding site5814,5855
Score1.0
Seed1
Au0.706
Energy-18.9
Binding len17
Me-5.814
Phylopstem0.012061563636363636
Phylopflank0.11626646999999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure