Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGTCAGGGGCTGCAGATGTTTTTGCAACAATCAAATCCTGGGTTG
.((((((((((((((.(((..&)))...))))))))).........................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004898
GeneSymbolCLOCK
Binding site2093,2139
Score0.923
Seed1
Au0.574
Energy-21.0
Binding len46
Me-4.026
Phylopstem1.0950369641025643
Phylopflank0.799510245
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end5
PositionCDS
2D Structure