Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTGCTGCTGTCAATGCATTGCATGGCAGGTG
(((((.(((.((((((((((..&.)))..))))))).))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004902
GeneSymbolRBM39
Binding site1767,1799
Score0.923
Seed0
Au0.544
Energy-20.3
Binding len24
Me-7.081
Phylopstem0.12131496166666665
Phylopflank0.01650402812499999
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure