Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGTCAGGGTATGCTGTTTGCTGATGGGCAGGGACACCCCTGCAGGGTCTC
(((((((((((((((((((..&.)))).))))......))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004913
GeneSymbolVPS9D1
Binding site2441,2493
Score0.923
Seed1
Au0.338
Energy-29.6
Binding len28
Me-3.938
Phylopstem0.7883624307692307
Phylopflank2.91287113625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure