Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGATTTGGCAGTGCTAGGTA
(((((((((.(((..(((((((&)))))))..)))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004937
GeneSymbolCTNS
Binding site3379,3404
Score0.846
Seed1
Au0.559
Energy-20.0
Binding len25
Me-6.772
Phylopstem-0.4756612222222221
Phylopflank-0.19612901750000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure