Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGTTGGTACTGTTGGTGGCCAGGG
.((((((...(((((((.....&.))).))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004948
GeneSymbolDSC1
Binding site2553,2580
Score0.846
Seed1
Au0.544
Energy-17.3
Binding len19
Me-8.406
Phylopstem1.167733
Phylopflank1.3595716537499998
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure