Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTTGCCAAAATTCCCATTAGTTATTTATAAAATGTTGTAAGTCAGGC
.((((((.((((((((((((((&))))))))............................)))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004949
GeneSymbolDSC2
Binding site8897,8947
Score0.846
Seed1
Au0.706
Energy-16.9
Binding len50
Me-6.107
Phylopstem0.34305707142857156
Phylopflank0.054171838750000006
Longest consecutive pairings8
Position of longest consecutive pairings42
Pairings in 3prime end8
Position3UTR
2D Structure