Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGGAAGGAGTGAGGCCCAGCCCCATGCAGCTGGAGCTGCGGA
((((((((.((((((((.(((&.)))...)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331030
GeneSymbolPDXK
Binding site776,822
Score0.808
Seed1
Au0.382
Energy-27.4
Binding len25
Me-4.994
Phylopstem2.3241813749999998
Phylopflank3.7824196499999996
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure