Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGAGGTTGCTAGTCTA
((((...(((((((..(((((&))))))))))))..)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004964
GeneSymbolHDAC1
Binding site2032,2051
Score0.846
Seed0
Au0.632
Energy-22.1
Binding len19
Me-12.47
Phylopstem0.9354725714285713
Phylopflank0.8314366225
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure