Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAAGGTGTAGAGTGTGCCTTTTTGTGAATCCTCCTCTGATCATGAGGGTCTT
(((((((((((((((((((..&)))))))))........)))...........................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005012
GeneSymbolROR1
Binding site3821,3876
Score0.923
Seed1
Au0.544
Energy-24.1
Binding len55
Me-3.938
Phylopstem0.4641178962962964
Phylopflank0.36625060875000004
Longest consecutive pairings9
Position of longest consecutive pairings46
Pairings in 3prime end6
Position3UTR
2D Structure