Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAAAGGAAAAAGGGTTC
.((((((....(((((((((.&))))))).))....)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005012
GeneSymbolROR1
Binding site4059,4080
Score1.0
Seed1
Au0.471
Energy-23.7
Binding len21
Me-11.231
Phylopstem0.029792210000000034
Phylopflank0.33547686750000005
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure